VThunter

a database for single-cell screening of virus target cells in animal kingdom

Rat

Scientific Name: Rattus norvegicus

Taxonomy: Cellular organisms-> Eukaryota-> Opisthokonta-> Metazoa-> Eumetazoa-> Bilateria-> Deuterostomia-> Chordata-> Craniata-> Vertebrata-> Gnathostomata-> Teleostomi-> Euteleostomi-> Sarcopterygii-> Dipnotetrapodomorpha-> Tetrapoda-> Amniota-> Mammalia-> Theria-> Eutheria-> Boreoeutheria-> Euarchontoglires-> Glires-> Rodentia-> Myomorpha-> Muroidea-> Muridae-> Murinae

Coxsackievirus B1

Family: Picornaviridae

Receptor: ITGB6

Receptor ITGB6 information

Summary: This gene encodes a protein that is a member of the integrin superfamily. Members of this family are adhesion receptors that function in signaling from the extracellular matrix to the cell. Integrins are heterodimeric integral membrane proteins composed of an alpha chain and a beta chain. The encoded protein forms a dimer with an alpha v chain and this heterodimer can bind to ligands like fibronectin and transforming growth factor beta 1. Alternate splicing results in multiple transcript variants.? [NCBI] [Proteinatlas]

Data Source

Data set information

Project	Date	Technology	Tissue	Condition	Cell	PMID/DOI
Vthunter_1001	2019.12	10X Genomics	Lung	Normal	5029	Link
Vthunter_1002	2019.12	10X Genomics	Lung	Normal	5924	Link
Vthunter_1009	2017.11	Fluidigm C1	UrogenitalSinus	Normal	114	Link
Vthunter_110073	2019.12	MARS-seq	TotalBrain	Normal	2304	Link

Featureplot of receptors

mRNA expression of ITGB6 in human tissues [NCBI]

Expression: Biased expression in lung (RPKM 25.8), urinary bladder (RPKM 17.2) and 12 other tissues

Protein expression of ITGB6 in human tissues [Proteinatlas]